Scientific publications

M. K. Takahashi*, X. Tan*, A. J. Dy*, D. Braff, R. T Akana, Y. Furuta, N. Donghia, A. Ananthakrishnan, J. J. Collins “A low-cost paper-based synthetic biology platform for analyzing gut microbiota and host biomarkers.” Nature Communications 9, no. 1 (2018): 3347.

A. Huang, P. Q. Nguyen, J. C. Stark, M. K. Takahashi, N. Donghia, T. Ferrante, A. J. Dy, K. J. Hsu, R. S. Dubner, K. Pardee, M. C. Jewett, J. J. Collins “BioBits™ Explorer: A modular synthetic biology education kit.” Science Advances Vol. 4, no. 8, eaat5105

E. Yeung, A. J. Dy , K. B. Martin, A. H. Ng, D. Del Vecchio, J. L. Beck, J. J. Collins, and R. M. Murray. “The Effect of Compositional Context on Synthetic Gene Networks.” Cell Systems 5 (2017): 11–24 (pdf)

J. S. Gootenberg*, O. O. Abudayyeh*, J. W. Lee, P. Essletzbichler, A. J. Dy , J. Joung, V. Verdine, N. Donghia, N. M. Daringer, C. A. Freije, C. Myhrvold, R. P. Bhattacharyya, J. Livny, A. Regev, E. V. Koonin, D. T. Hung, P. C. Sabeti, J. J. Collins, and F. Zhang. “Nucleic acid detection with CRISPR-Cas13a/C2c2.” Science 356.6336 (2017) 438-442. (pdf)

D. Del Vecchio, A. J. Dy , and Y. Qian. “Control theory meets synthetic biology.” Journal of The Royal Society Interface 13.120 (2016): 20160380. [review] (pdf)

A. J. Dy , and J. J. Collins. “Engineering Models to Scale.” Cell 165.3 (2016): 516-517. [preview] (pdf)

A. J. Dy , A. Cosmanescu, J. Sluka, J. A. Glazier, D. Stupack, D. Amarie. “Fabricating microfluidic valve master molds in SU-8 photoresist.” Journal of Micromechanics and Microengineering 24.5 (2014): 057001. (pdf)

Presentations

“Cell-free synthetic biology for viral diagnostics”. First International Symposium on Emergent Arbovirus, Guadalajara, Mexico (Aug. 2017).

“Strategies for doing and communicating your research”. Workshop for International Genetically Engineered Machine (iGEM) 2016 Competition (Oct. 2016)